Carabid predator community and diet data used in the article "Diversified cropping strengthens herbivore regulation by providing seasonal resource continuity to predators"

SND-ID: 2024-17. Version: 1. DOI: https://doi.org/10.5878/7qn6-ec60

Citation

Creator/Principal investigator(s)

Janina Heinen - Swedish University of Agricultural Sciences, Department of Ecology orcid

Riccardo Bommarco - Swedish University of Agricultural Sciences, Department of Ecology orcid

Research principal

Swedish University of Agricultural Sciences - Department of Ecology rorId

Principal's reference number

SLU.ekol.2024.4.4.IÄ-9

Description

The shared data contain information on predator-prey interaction metrics such as the vulnerability of certain prey, as well as the trophic redundancy of predators in these networks. Further, the datasets contain species richnesses and abundance of Carabid predators, herbivores, soil fauna.

Include data files are:
Data_submission_BetaDiv_community.csv, 19 rows × 8 columns
Data_submission_BetaDiv_dietTurnover.csv, 124 rows × 7 columns
Data_submission_analysisI_and_II.csv, 171 rows × 8 columns
Data_submission_analysisIII.csv, 19 rows × 30 columns

Besides diet based metrics, the file "Data_submission_analysisIII.csv" contains arthropod community sampling data (pitfall, soil extraction, sweep netting), whereas the file "Data_submission_analysisI_and_II.csv" only contains information on Carabids diets, and the individual that were subject to gut content analysis. Based on these individuals, both the turnover in the communities per se ("Data_submission_BetaDiv_community.csv), as well as their diet turnover was assessed (" Data_submission_BetaDiv_dietTurnover.csv").

... Show more..
The shared data contain information on predator-prey interaction metrics such as the vulnerability of certain prey, as well as the trophic redundancy of predators in these networks. Further, the datasets contain species richnesses and abundance of Carabid predators, herbivores, soil fauna.

Include data files are:
Data_submission_BetaDiv_community.csv, 19 rows × 8 columns
Data_submission_BetaDiv_dietTurnover.csv, 124 rows × 7 columns
Data_submission_analysisI_and_II.csv, 171 rows × 8 columns
Data_submission_analysisIII.csv, 19 rows × 30 columns

Besides diet based metrics, the file "Data_submission_analysisIII.csv" contains arthropod community sampling data (pitfall, soil extraction, sweep netting), whereas the file "Data_submission_analysisI_and_II.csv" only contains information on Carabids diets, and the individual that were subject to gut content analysis. Based on these individuals, both the turnover in the communities per se ("Data_submission_BetaDiv_community.csv), as well as their diet turnover was assessed (" Data_submission_BetaDiv_dietTurnover.csv").

See the READme files for more information. Show less..

Data contains personal data

Yes

Type of personal data

code key (not published) can link field_IDs to coordinates

Code key exists

Yes

Language

Method and outcome

Time period(s) investigated

2020-05-01 – 2020-07-30

Data format / data structure

Species and taxons

Insecta
Arthropoda

Data collection

Data collection 1

  • Mode of collection: Measurements and tests
  • Description of the mode of collection: The data were collected using pitfall trapping, sweep netting, soil sampling, and next generation sequencing
  • Time period(s) for data collection: 2020-05-01 – 2020-07-30
  • Data collector: Swedish University of Agricultural Sciences
  • Source of the data: Research data, Biological samples
  • Temporal resolution: 1 month

Data collection 2

  • Description of the mode of collection: DNA metabarcoding performed through an Illumina NovaSeq6000 SP Flowcell v1.5 PE 2x150 run (Illumina Inc., San Diego, California, USA)
  • Time period(s) for data collection: 2020-05-01 – 2020-07-31
  • Data collector: Bioname
  • Instrument: Illumina NovaSeq6000 SP Flowcell v1.5 PE 2x150 run - Illumina NovaSeq6000 SP Flowcell v1.5 PE 2x150 run
  • Sample: Carabid gut contents
    Carabid gut content samples derived through regurgitation of live Carabids.
  • Source of the data: Biological samples
Geographic coverage

Geographic spread

Geographic location: Sweden, Halland County

Geographic description: Data were collected across 19 sites in Halland county ranging from approx. Laholm to Kungsbacka

Administrative information

Responsible department/unit

Department of Ecology

Contributor(s)

Virginia Dominguez - Estación Biológica de Doñana orcid

Eero Vesterinen - University of Turku orcid

Ignasi Bartomeus - Estación Biológica de Doñana orcid

Gerard Malsher - Swedish University of Agricultural Sciences, Department of Ecology

Guillermo Aguilera - Swedish University of Agricultural Sciences, Department of Ecology orcid

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Virginia Dominguez - Estación Biológica de Doñana orcid

Eero Vesterinen - University of Turku orcid

Ignasi Bartomeus - Estación Biológica de Doñana orcid

Gerard Malsher - Swedish University of Agricultural Sciences, Department of Ecology

Guillermo Aguilera - Swedish University of Agricultural Sciences, Department of Ecology orcid

Tomas Roslin - Swedish University of Agricultural Sciences orcid

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Commissioning organisation

Swedish University of Agricultural Sciences - 202100-2817

Funding

  • Funding agency: Swedish University of Agricultural Sciences rorId
  • Project name on the application: Senior career funding from the Faculty of Natural Resources and Agricultural Sciences awarded to Riccardo Bommarco
Topic and keywords

Research area

Natural sciences (Standard för svensk indelning av forskningsämnen 2011)

Environment (INSPIRE topic categories)

Publications

Heinen J., Dominguez V., Aguilera G., Malsher G., Vesterinen E., Roslin T., Bommarco R., Bartomeus I. (2024) Diversified cropping strengthens herbivore regulation by providing seasonal resource continuity to predators. Journal of Applied Ecology (Accepted)

If you have published anything based on these data, please notify us with a reference to your publication(s). If you are responsible for the catalogue entry, you can update the metadata/data description in DORIS.

License

CC BY 4.0

Versions

Version 1. 2024-04-30

Version 1: 2024-04-30

DOI: https://doi.org/10.5878/7qn6-ec60

Contact for questions about the data

SLU Arkiv

arkiv@slu.se

This resource has the following relations

Is suplemented by Raw sequencing data

Published: 2024-04-30